I have just finished, and really enjoyed reading the first two books in Sarah Rees Brennan's Lynburn Legacy trilogy!! (Unspoken, Untold!) I'd also rec her Demon Trilogy, though the first book is told from a guy's POV, the other two are girls!
Sadly I can't think of any ya I've read with queer characters :(
you may have read these already but the montmaray journals by michelle cooper is a great series! if you're into fantasy i'd also recommend the old kingdom trilogy by garth nix and the graceling realm series by krisin cashore. all female protags :D
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